Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CBX8Q9HC52 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC16.58■□□□□ 0.25
CBX8Q9HC52 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CBX8Q9HC52 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 AC092865.5-201ENST00000545435 363 ntBASIC16.58■□□□□ 0.24
CBX8Q9HC52 AC138761.1-201ENST00000584393 385 ntBASIC16.58■□□□□ 0.24
CBX8Q9HC52 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 AL662799.1-202ENST00000614205 422 ntBASIC16.58■□□□□ 0.24
CBX8Q9HC52 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 AC083964.2-201ENST00000623988 2396 ntBASIC16.58■□□□□ 0.24
CBX8Q9HC52 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC16.58■□□□□ 0.24
CBX8Q9HC52 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CBX8Q9HC52 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 C8orf49-201ENST00000525043 1968 ntBASIC16.57■□□□□ 0.24
CBX8Q9HC52 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 AL139094.1-201ENST00000405549 1188 ntBASIC16.57■□□□□ 0.24
CBX8Q9HC52 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CBX8Q9HC52 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CBX8Q9HC52 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.56■□□□□ 0.24
CBX8Q9HC52 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CBX8Q9HC52 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms