Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NPAS2Q99743 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NPAS2Q99743 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NPAS2Q99743 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.6□□□□□ -0.07
NPAS2Q99743 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.59□□□□□ -0.07
NPAS2Q99743 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NPAS2Q99743 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.59□□□□□ -0.07
NPAS2Q99743 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
NPAS2Q99743 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
NPAS2Q99743 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC14.59□□□□□ -0.07
NPAS2Q99743 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
NPAS2Q99743 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.59□□□□□ -0.07
NPAS2Q99743 TOMM22P5-201ENST00000416399 439 ntBASIC14.59□□□□□ -0.07
NPAS2Q99743 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.59□□□□□ -0.07
NPAS2Q99743 KRT17P7-201ENST00000451704 1104 ntBASIC14.59□□□□□ -0.07
NPAS2Q99743 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.59□□□□□ -0.07
NPAS2Q99743 RN7SL399P-201ENST00000471648 279 ntBASIC14.59□□□□□ -0.07
NPAS2Q99743 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 TMEM261P1-201ENST00000604899 340 ntBASIC14.59□□□□□ -0.07
NPAS2Q99743 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.59□□□□□ -0.07
NPAS2Q99743 AC126335.2-201ENST00000623362 4637 ntBASIC14.59□□□□□ -0.07
NPAS2Q99743 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.59□□□□□ -0.07
NPAS2Q99743 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.59□□□□□ -0.07
NPAS2Q99743 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
NPAS2Q99743 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.59□□□□□ -0.07
NPAS2Q99743 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.59□□□□□ -0.07
NPAS2Q99743 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NPAS2Q99743 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.58□□□□□ -0.07
NPAS2Q99743 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
NPAS2Q99743 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.58□□□□□ -0.07
NPAS2Q99743 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.58□□□□□ -0.07
NPAS2Q99743 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.58□□□□□ -0.07
NPAS2Q99743 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NPAS2Q99743 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 CICP20-201ENST00000443330 2801 ntBASIC14.58□□□□□ -0.08
NPAS2Q99743 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.58□□□□□ -0.08
NPAS2Q99743 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 GK-202ENST00000378941 458 ntTSL 3 BASIC14.58□□□□□ -0.08
NPAS2Q99743 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 AL512384.1-201ENST00000406683 331 ntBASIC14.58□□□□□ -0.08
NPAS2Q99743 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.58□□□□□ -0.08
NPAS2Q99743 RN7SL837P-201ENST00000463010 287 ntBASIC14.58□□□□□ -0.08
NPAS2Q99743 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.58□□□□□ -0.08
NPAS2Q99743 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC14.58□□□□□ -0.08
NPAS2Q99743 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NPAS2Q99743 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
NPAS2Q99743 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
NPAS2Q99743 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.58□□□□□ -0.08
NPAS2Q99743 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 AL157414.3-201ENST00000624276 1954 ntBASIC14.58□□□□□ -0.08
NPAS2Q99743 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NPAS2Q99743 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NPAS2Q99743 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NPAS2Q99743 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms