Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.45□□□□□ -0.1
PKP4Q99569 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.45□□□□□ -0.1
PKP4Q99569 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.45□□□□□ -0.1
PKP4Q99569 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.45□□□□□ -0.1
PKP4Q99569 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.45□□□□□ -0.1
PKP4Q99569 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.45□□□□□ -0.1
PKP4Q99569 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.45□□□□□ -0.1
PKP4Q99569 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.45□□□□□ -0.1
PKP4Q99569 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.45□□□□□ -0.1
PKP4Q99569 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.45□□□□□ -0.1
PKP4Q99569 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.45□□□□□ -0.1
PKP4Q99569 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.45□□□□□ -0.1
PKP4Q99569 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.45□□□□□ -0.1
PKP4Q99569 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.45□□□□□ -0.1
PKP4Q99569 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.45□□□□□ -0.1
PKP4Q99569 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.45□□□□□ -0.1
PKP4Q99569 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.45□□□□□ -0.1
PKP4Q99569 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 AC139749.1-202ENST00000617529 3139 ntBASIC14.45□□□□□ -0.1
PKP4Q99569 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PKP4Q99569 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PKP4Q99569 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.45□□□□□ -0.1
PKP4Q99569 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PKP4Q99569 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
PKP4Q99569 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC14.44□□□□□ -0.1
PKP4Q99569 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.44□□□□□ -0.1
PKP4Q99569 AC022447.6-201ENST00000515522 438 ntBASIC14.44□□□□□ -0.1
PKP4Q99569 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.44□□□□□ -0.1
PKP4Q99569 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC14.44□□□□□ -0.1
PKP4Q99569 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 C2orf69P2-201ENST00000562032 1123 ntBASIC14.44□□□□□ -0.1
PKP4Q99569 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.44□□□□□ -0.1
PKP4Q99569 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.44□□□□□ -0.1
PKP4Q99569 BX088702.1-201ENST00000610784 235 ntBASIC14.44□□□□□ -0.1
PKP4Q99569 AC002472.3-201ENST00000640124 621 ntBASIC14.44□□□□□ -0.1
PKP4Q99569 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 AGGF1P1-201ENST00000509500 2073 ntBASIC14.44□□□□□ -0.1
PKP4Q99569 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PKP4Q99569 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.44□□□□□ -0.1
PKP4Q99569 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PKP4Q99569 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
PKP4Q99569 AC007191.1-201ENST00000623179 2995 ntBASIC14.43□□□□□ -0.1
PKP4Q99569 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.43□□□□□ -0.1
PKP4Q99569 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PKP4Q99569 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms