Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC12.65□□□□□ -0.39
USP9XQ93008 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC12.65□□□□□ -0.39
USP9XQ93008 AC005865.2-202ENST00000635814 725 ntBASIC12.65□□□□□ -0.39
USP9XQ93008 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
USP9XQ93008 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
USP9XQ93008 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.65□□□□□ -0.39
USP9XQ93008 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.65□□□□□ -0.39
USP9XQ93008 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
USP9XQ93008 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 AGGF1P1-201ENST00000509500 2073 ntBASIC12.64□□□□□ -0.39
USP9XQ93008 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.64□□□□□ -0.39
USP9XQ93008 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.64□□□□□ -0.39
USP9XQ93008 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.64□□□□□ -0.39
USP9XQ93008 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 FAM86FP-201ENST00000338711 969 ntBASIC12.64□□□□□ -0.39
USP9XQ93008 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
USP9XQ93008 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 RNA5SP406-201ENST00000516106 112 ntBASIC12.64□□□□□ -0.39
USP9XQ93008 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.64□□□□□ -0.39
USP9XQ93008 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
USP9XQ93008 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.64□□□□□ -0.39
USP9XQ93008 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.64□□□□□ -0.39
USP9XQ93008 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
USP9XQ93008 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
USP9XQ93008 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.64□□□□□ -0.39
USP9XQ93008 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.64□□□□□ -0.39
USP9XQ93008 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 C6orf203-201ENST00000311381 900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 EEF1DP5-201ENST00000431410 772 ntBASIC12.64□□□□□ -0.39
USP9XQ93008 AC006328.1-201ENST00000437571 379 ntBASIC12.64□□□□□ -0.39
USP9XQ93008 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
USP9XQ93008 AC079414.2-201ENST00000567157 1104 ntBASIC12.64□□□□□ -0.39
USP9XQ93008 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
USP9XQ93008 AL136172.1-201ENST00000598590 1394 ntBASIC12.64□□□□□ -0.39
USP9XQ93008 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
USP9XQ93008 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
USP9XQ93008 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
USP9XQ93008 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC12.63□□□□□ -0.39
USP9XQ93008 OR52M2P-201ENST00000414298 959 ntBASIC12.63□□□□□ -0.39
USP9XQ93008 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.63□□□□□ -0.39
USP9XQ93008 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.63□□□□□ -0.39
USP9XQ93008 RHOQP2-201ENST00000449922 579 ntBASIC12.63□□□□□ -0.39
USP9XQ93008 RN7SL69P-201ENST00000468423 272 ntBASIC12.63□□□□□ -0.39
USP9XQ93008 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC12.63□□□□□ -0.39
USP9XQ93008 AC078814.4-201ENST00000546650 327 ntBASIC12.63□□□□□ -0.39
USP9XQ93008 MIR4254-201ENST00000581063 76 ntBASIC12.63□□□□□ -0.39
USP9XQ93008 RN7SL121P-201ENST00000584223 273 ntBASIC12.63□□□□□ -0.39
USP9XQ93008 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 MIR7848-201ENST00000617402 101 ntBASIC12.63□□□□□ -0.39
USP9XQ93008 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.63□□□□□ -0.39
USP9XQ93008 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.63□□□□□ -0.39
USP9XQ93008 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.63□□□□□ -0.39
USP9XQ93008 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
USP9XQ93008 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
USP9XQ93008 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.63□□□□□ -0.39
USP9XQ93008 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
USP9XQ93008 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.63□□□□□ -0.39
USP9XQ93008 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USP9XQ93008 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
USP9XQ93008 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms