Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 AC068587.3-201ENST00000526613 355 ntBASIC15.3■□□□□ 0.04
SCG3Q8WXD2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 AC093813.1-201ENST00000605066 256 ntBASIC15.3■□□□□ 0.04
SCG3Q8WXD2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 MIR6775-201ENST00000617557 69 ntBASIC15.3■□□□□ 0.04
SCG3Q8WXD2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 CICP8-201ENST00000455800 2813 ntBASIC15.3■□□□□ 0.04
SCG3Q8WXD2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCG3Q8WXD2 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 MBLAC2-202ENST00000514906 1936 ntBASIC15.29■□□□□ 0.04
SCG3Q8WXD2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 AC093525.8-201ENST00000624099 1342 ntBASIC15.29■□□□□ 0.04
SCG3Q8WXD2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 NUS1P3-201ENST00000423502 862 ntBASIC15.29■□□□□ 0.04
SCG3Q8WXD2 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 BCRP2-202ENST00000447763 634 ntBASIC15.29■□□□□ 0.04
SCG3Q8WXD2 CROCCP4-201ENST00000457096 498 ntBASIC15.29■□□□□ 0.04
SCG3Q8WXD2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 BCRP6-201ENST00000510112 632 ntBASIC15.29■□□□□ 0.04
SCG3Q8WXD2 BCRP7-201ENST00000511549 544 ntBASIC15.29■□□□□ 0.04
SCG3Q8WXD2 AC026410.3-201ENST00000514280 936 ntBASIC15.29■□□□□ 0.04
SCG3Q8WXD2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCG3Q8WXD2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms