Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 CICP24-201ENST00000605464 2705 ntBASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 ISCA2P1-201ENST00000425548 448 ntBASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 OR2R1P-201ENST00000441404 914 ntBASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 AC012618.1-201ENST00000461223 412 ntBASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 PGAM1P5-201ENST00000548011 764 ntBASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 SORD2P-201ENST00000558556 1069 ntBASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 AC091812.3-201ENST00000621362 345 ntBASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 AC068587.6-202ENST00000641839 5619 ntBASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEDD1Q8NHV4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AC022447.6-201ENST00000515522 438 ntBASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 CU633904.3-201ENST00000624042 1029 ntBASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NEDD1Q8NHV4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 AC239868.1-201ENST00000369385 493 ntBASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 TPT1P11-201ENST00000458482 498 ntBASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 AC124068.2-201ENST00000569473 1109 ntBASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 AF254983.2-201ENST00000612331 135 ntBASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEDD1Q8NHV4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms