Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 AC020910.6-201ENST00000623084 1459 ntBASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 AC011840.2-201ENST00000563063 1520 ntBASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 AC098850.1-201ENST00000419919 790 ntBASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 SPTLC1P1-201ENST00000447199 261 ntBASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 TMEM198B-204ENST00000484016 896 ntBASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 AC022616.1-201ENST00000518688 554 ntBASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 RRP7BP-205ENST00000566851 833 ntBASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 SLC7A15P-201ENST00000424028 1363 ntBASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CLDN22Q8N7P3 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 MYADML-201ENST00000474610 2147 ntBASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 MIR661-201ENST00000384842 89 ntBASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 MIR770-201ENST00000390219 98 ntBASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 BRI3BPP1-201ENST00000594224 787 ntBASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 AC007431.3-201ENST00000623221 587 ntBASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 COL6A4P2-202ENST00000504443 2753 ntBASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CLDN22Q8N7P3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms