Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AC140479.7-201ENST00000636301 2332 ntBASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AC006453.4-201ENST00000636949 1252 ntBASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AC023090.2-201ENST00000625182 2110 ntBASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC33Q8N5R6 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AL390755.1-201ENST00000623716 2027 ntBASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 TPM3P8-201ENST00000330554 643 ntBASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AL591846.1-201ENST00000451736 433 ntBASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CCDC33Q8N5R6 AL354989.2-201ENST00000435838 1540 ntBASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms