Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL23A1Q86Y22 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 AC106827.1-201ENST00000366454 431 ntBASIC18.18■□□□□ 0.5
COL23A1Q86Y22 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 RN7SL288P-201ENST00000490496 291 ntBASIC18.18■□□□□ 0.5
COL23A1Q86Y22 RN7SL375P-201ENST00000492442 298 ntBASIC18.18■□□□□ 0.5
COL23A1Q86Y22 RN7SL767P-201ENST00000493013 295 ntBASIC18.18■□□□□ 0.5
COL23A1Q86Y22 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 AL021707.6-201ENST00000609212 491 ntBASIC18.18■□□□□ 0.5
COL23A1Q86Y22 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL23A1Q86Y22 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 KRT18P37-201ENST00000520711 1282 ntBASIC18.17■□□□□ 0.5
COL23A1Q86Y22 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 AC023968.2-201ENST00000560593 1049 ntBASIC18.17■□□□□ 0.5
COL23A1Q86Y22 COX5A-205ENST00000568517 582 ntTSL 3 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 AC090386.2-201ENST00000623010 1039 ntBASIC18.17■□□□□ 0.5
COL23A1Q86Y22 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL23A1Q86Y22 MROH4P-201ENST00000431302 1578 ntBASIC18.17■□□□□ 0.5
COL23A1Q86Y22 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 AC046158.3-201ENST00000624947 2558 ntBASIC18.16■□□□□ 0.5
COL23A1Q86Y22 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COL23A1Q86Y22 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms