Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.22□□□□□ -0.29
EFNB1P98172 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.22□□□□□ -0.29
EFNB1P98172 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
EFNB1P98172 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.22□□□□□ -0.29
EFNB1P98172 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
EFNB1P98172 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
EFNB1P98172 AL022313.4-201ENST00000562756 2046 ntBASIC13.22□□□□□ -0.29
EFNB1P98172 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
EFNB1P98172 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.22□□□□□ -0.29
EFNB1P98172 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.22□□□□□ -0.29
EFNB1P98172 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
EFNB1P98172 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
EFNB1P98172 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 MRPS18AP1-201ENST00000414458 589 ntBASIC13.21□□□□□ -0.29
EFNB1P98172 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.21□□□□□ -0.29
EFNB1P98172 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 AC104506.1-201ENST00000609247 429 ntBASIC13.21□□□□□ -0.29
EFNB1P98172 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.21□□□□□ -0.29
EFNB1P98172 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.21□□□□□ -0.29
EFNB1P98172 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.21□□□□□ -0.29
EFNB1P98172 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.21□□□□□ -0.29
EFNB1P98172 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.21□□□□□ -0.29
EFNB1P98172 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.21□□□□□ -0.29
EFNB1P98172 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
EFNB1P98172 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
EFNB1P98172 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
EFNB1P98172 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
EFNB1P98172 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
EFNB1P98172 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNB1P98172 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
EFNB1P98172 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNB1P98172 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNB1P98172 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.21□□□□□ -0.3
EFNB1P98172 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNB1P98172 AC135782.3-201ENST00000562782 2105 ntBASIC13.21□□□□□ -0.3
EFNB1P98172 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.21□□□□□ -0.3
EFNB1P98172 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.21□□□□□ -0.3
EFNB1P98172 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
EFNB1P98172 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.21□□□□□ -0.3
EFNB1P98172 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNB1P98172 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
EFNB1P98172 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
EFNB1P98172 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNB1P98172 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNB1P98172 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 LRRC59-203ENST00000576448 1531 ntBASIC13.2□□□□□ -0.3
EFNB1P98172 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
EFNB1P98172 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNB1P98172 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
EFNB1P98172 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
EFNB1P98172 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNB1P98172 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.2□□□□□ -0.3
EFNB1P98172 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms