Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MARK2P5-201ENST00000507649 634 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.23□□□□□ -0.29
GFRA1P56159 AC022217.1-201ENST00000521069 738 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.23□□□□□ -0.29
GFRA1P56159 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.23□□□□□ -0.29
GFRA1P56159 SNORD3B-2-202ENST00000571722 791 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 AL136295.7-201ENST00000619226 1200 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 AC015688.4-201ENST00000580780 1647 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
GFRA1P56159 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
GFRA1P56159 MIR600HG-201ENST00000449175 5984 ntBASIC13.23□□□□□ -0.29
GFRA1P56159 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.23□□□□□ -0.29
GFRA1P56159 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GFRA1P56159 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 FAM90A7P-201ENST00000382628 1395 ntBASIC13.22□□□□□ -0.29
GFRA1P56159 FAM90A23P-201ENST00000400136 1395 ntBASIC13.22□□□□□ -0.29
GFRA1P56159 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 LINC02228-204ENST00000642115 2962 ntBASIC13.22□□□□□ -0.29
GFRA1P56159 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
GFRA1P56159 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.22□□□□□ -0.29
GFRA1P56159 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GFRA1P56159 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
GFRA1P56159 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
GFRA1P56159 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.22□□□□□ -0.29
GFRA1P56159 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.22□□□□□ -0.29
GFRA1P56159 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.22□□□□□ -0.29
GFRA1P56159 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 SCARNA21-201ENST00000517026 139 ntBASIC13.22□□□□□ -0.29
GFRA1P56159 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.22□□□□□ -0.29
GFRA1P56159 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.22□□□□□ -0.29
GFRA1P56159 AC008805.1-201ENST00000590892 364 ntBASIC13.22□□□□□ -0.29
GFRA1P56159 AL645939.5-201ENST00000606834 243 ntBASIC13.22□□□□□ -0.29
GFRA1P56159 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GFRA1P56159 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 TMBIM7P-202ENST00000641474 1516 ntBASIC13.22□□□□□ -0.29
GFRA1P56159 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.22□□□□□ -0.29
GFRA1P56159 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.22□□□□□ -0.29
GFRA1P56159 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.22□□□□□ -0.29
GFRA1P56159 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
GFRA1P56159 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GFRA1P56159 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.22□□□□□ -0.29
GFRA1P56159 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 AC144522.1-201ENST00000625111 1658 ntBASIC13.21□□□□□ -0.29
GFRA1P56159 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
GFRA1P56159 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.21□□□□□ -0.29
GFRA1P56159 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.21□□□□□ -0.29
GFRA1P56159 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.21□□□□□ -0.29
GFRA1P56159 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
GFRA1P56159 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GFRA1P56159 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.21□□□□□ -0.29
GFRA1P56159 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms