Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH15P55291 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH15P55291 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
CDH15P55291 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
CDH15P55291 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH15P55291 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH15P55291 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.93□□□□□ -0.18
CDH15P55291 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CDH15P55291 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDH15P55291 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDH15P55291 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
CDH15P55291 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 RBPMS2P1-201ENST00000437762 623 ntBASIC13.92□□□□□ -0.18
CDH15P55291 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 AC098859.1-201ENST00000502915 1238 ntBASIC13.92□□□□□ -0.18
CDH15P55291 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.92□□□□□ -0.18
CDH15P55291 AC093214.1-201ENST00000511688 1107 ntBASIC13.92□□□□□ -0.18
CDH15P55291 AC105233.2-201ENST00000523697 349 ntBASIC13.92□□□□□ -0.18
CDH15P55291 AF228730.5-201ENST00000530288 346 ntBASIC13.92□□□□□ -0.18
CDH15P55291 AC069262.1-201ENST00000539058 672 ntBASIC13.92□□□□□ -0.18
CDH15P55291 DUX4L27-201ENST00000554796 1261 ntBASIC13.92□□□□□ -0.18
CDH15P55291 AC051619.7-201ENST00000568314 623 ntBASIC13.92□□□□□ -0.18
CDH15P55291 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.92□□□□□ -0.18
CDH15P55291 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDH15P55291 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDH15P55291 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.92□□□□□ -0.18
CDH15P55291 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH15P55291 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH15P55291 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH15P55291 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH15P55291 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH15P55291 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.91□□□□□ -0.18
CDH15P55291 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.91□□□□□ -0.18
CDH15P55291 GPS2P2-201ENST00000430745 888 ntBASIC13.91□□□□□ -0.18
CDH15P55291 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.91□□□□□ -0.18
CDH15P55291 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.91□□□□□ -0.18
CDH15P55291 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH15P55291 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDH15P55291 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.91□□□□□ -0.18
CDH15P55291 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.91□□□□□ -0.18
CDH15P55291 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.91□□□□□ -0.18
CDH15P55291 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.91□□□□□ -0.18
CDH15P55291 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms