Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.45■□□□□ 0.06
CDH6P55285 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 TPM3P8-201ENST00000330554 643 ntBASIC15.45■□□□□ 0.06
CDH6P55285 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 AC005229.1-201ENST00000392885 409 ntBASIC15.45■□□□□ 0.06
CDH6P55285 BCRP2-202ENST00000447763 634 ntBASIC15.45■□□□□ 0.06
CDH6P55285 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH6P55285 USP32P1-208ENST00000506594 1164 ntBASIC15.45■□□□□ 0.06
CDH6P55285 GCOM2-201ENST00000509133 1104 ntBASIC15.45■□□□□ 0.06
CDH6P55285 BCRP6-201ENST00000510112 632 ntBASIC15.45■□□□□ 0.06
CDH6P55285 BCRP7-201ENST00000511549 544 ntBASIC15.45■□□□□ 0.06
CDH6P55285 CR383656.12-201ENST00000549567 513 ntBASIC15.45■□□□□ 0.06
CDH6P55285 AC005225.4-201ENST00000557330 545 ntBASIC15.45■□□□□ 0.06
CDH6P55285 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH6P55285 AC025279.2-201ENST00000569730 653 ntBASIC15.45■□□□□ 0.06
CDH6P55285 AC008735.3-201ENST00000596646 500 ntBASIC15.45■□□□□ 0.06
CDH6P55285 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH6P55285 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CDH6P55285 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDH6P55285 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH6P55285 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CDH6P55285 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH6P55285 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH6P55285 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDH6P55285 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH6P55285 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH6P55285 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH6P55285 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
CDH6P55285 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH6P55285 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CDH6P55285 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 TMEM14DP-201ENST00000422205 345 ntBASIC15.44■□□□□ 0.06
CDH6P55285 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.44■□□□□ 0.06
CDH6P55285 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.44■□□□□ 0.06
CDH6P55285 AL391280.1-201ENST00000506969 1062 ntBASIC15.44■□□□□ 0.06
CDH6P55285 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 ECM1P1-201ENST00000604092 1279 ntBASIC15.44■□□□□ 0.06
CDH6P55285 AC012645.4-201ENST00000610691 1061 ntBASIC15.44■□□□□ 0.06
CDH6P55285 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 IGHV3-72-202ENST00000621503 303 ntBASIC15.44■□□□□ 0.06
CDH6P55285 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 HSPA7-201ENST00000445535 1927 ntBASIC15.44■□□□□ 0.06
CDH6P55285 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
CDH6P55285 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH6P55285 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH6P55285 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDH6P55285 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH6P55285 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms