Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC10.86□□□□□ -0.67
APOC4P55056 CALR4P-201ENST00000431943 946 ntBASIC10.86□□□□□ -0.67
APOC4P55056 AKR7A2P1-201ENST00000460134 915 ntBASIC10.86□□□□□ -0.67
APOC4P55056 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC10.86□□□□□ -0.67
APOC4P55056 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.86□□□□□ -0.67
APOC4P55056 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC10.86□□□□□ -0.67
APOC4P55056 AC131206.1-201ENST00000538078 1211 ntBASIC10.86□□□□□ -0.67
APOC4P55056 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
APOC4P55056 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.86□□□□□ -0.67
APOC4P55056 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
APOC4P55056 AC027601.3-201ENST00000622907 509 ntBASIC10.86□□□□□ -0.67
APOC4P55056 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
APOC4P55056 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC10.86□□□□□ -0.67
APOC4P55056 AL136172.1-201ENST00000598590 1394 ntBASIC10.86□□□□□ -0.67
APOC4P55056 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
APOC4P55056 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 INE2-201ENST00000630399 1874 ntBASIC10.85□□□□□ -0.67
APOC4P55056 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
APOC4P55056 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 MIR769-201ENST00000390225 118 ntBASIC10.85□□□□□ -0.67
APOC4P55056 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 OARD1-204ENST00000464633 717 ntTSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC10.85□□□□□ -0.67
APOC4P55056 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC10.85□□□□□ -0.67
APOC4P55056 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC10.85□□□□□ -0.67
APOC4P55056 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 AC013355.1-201ENST00000562625 723 ntBASIC10.85□□□□□ -0.67
APOC4P55056 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC10.85□□□□□ -0.67
APOC4P55056 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
APOC4P55056 AC132192.2-201ENST00000596206 1147 ntBASIC10.85□□□□□ -0.67
APOC4P55056 NDUFV2P1-201ENST00000596415 907 ntBASIC10.85□□□□□ -0.67
APOC4P55056 KC6-205ENST00000599934 556 ntTSL 4 BASIC10.85□□□□□ -0.67
APOC4P55056 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC10.85□□□□□ -0.67
APOC4P55056 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 AL162426.1-201ENST00000624141 743 ntBASIC10.85□□□□□ -0.67
APOC4P55056 AC100757.4-201ENST00000626934 759 ntBASIC10.85□□□□□ -0.67
APOC4P55056 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
APOC4P55056 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.85□□□□□ -0.67
APOC4P55056 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 AC092135.3-201ENST00000624151 1846 ntBASIC10.85□□□□□ -0.67
APOC4P55056 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
APOC4P55056 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
APOC4P55056 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms