Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCS2P54868 MRPL22P1-201ENST00000505398 616 ntBASIC16.92■□□□□ 0.3
HMGCS2P54868 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.92■□□□□ 0.3
HMGCS2P54868 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 AC124068.2-201ENST00000569473 1109 ntBASIC16.92■□□□□ 0.3
HMGCS2P54868 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCS2P54868 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCS2P54868 AC025262.2-201ENST00000623975 1056 ntBASIC16.92■□□□□ 0.3
HMGCS2P54868 AL161773.1-201ENST00000624845 863 ntBASIC16.92■□□□□ 0.3
HMGCS2P54868 CMC2-224ENST00000630396 481 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCS2P54868 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCS2P54868 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HMGCS2P54868 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCS2P54868 AC025271.4-201ENST00000621477 1726 ntBASIC16.92■□□□□ 0.3
HMGCS2P54868 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCS2P54868 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCS2P54868 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCS2P54868 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.92■□□□□ 0.3
HMGCS2P54868 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCS2P54868 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.92■□□□□ 0.3
HMGCS2P54868 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HMGCS2P54868 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGCS2P54868 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMGCS2P54868 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 MARK2P16-201ENST00000605714 1723 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HMGCS2P54868 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.91■□□□□ 0.3
HMGCS2P54868 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HMGCS2P54868 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.91■□□□□ 0.3
HMGCS2P54868 AC012362.1-201ENST00000434906 739 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.91■□□□□ 0.3
HMGCS2P54868 IGHV3-37-201ENST00000518544 340 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 AC107464.3-201ENST00000609172 737 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 MIR6858-201ENST00000620733 67 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 AC005618.3-201ENST00000624928 458 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HMGCS2P54868 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 AC132872.4-202ENST00000622924 2756 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HMGCS2P54868 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HMGCS2P54868 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HMGCS2P54868 PPT1-215ENST00000641471 2368 ntBASIC16.91■□□□□ 0.3
HMGCS2P54868 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
HMGCS2P54868 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
HMGCS2P54868 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HMGCS2P54868 KRT17P5-201ENST00000332088 839 ntBASIC16.9■□□□□ 0.3
HMGCS2P54868 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HMGCS2P54868 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.9■□□□□ 0.3
HMGCS2P54868 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HMGCS2P54868 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC16.9■□□□□ 0.3
HMGCS2P54868 ST13P19-201ENST00000442505 1124 ntBASIC16.9■□□□□ 0.3
HMGCS2P54868 AC018463.1-201ENST00000456674 917 ntBASIC16.9■□□□□ 0.3
HMGCS2P54868 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms