Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.44■□□□□ 0.22
TM4SF4P48230 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TM4SF4P48230 CDCA4P4-201ENST00000435216 680 ntBASIC16.44■□□□□ 0.22
TM4SF4P48230 SOD2-205ENST00000444946 917 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC16.44■□□□□ 0.22
TM4SF4P48230 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.44■□□□□ 0.22
TM4SF4P48230 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC16.44■□□□□ 0.22
TM4SF4P48230 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC16.44■□□□□ 0.22
TM4SF4P48230 AC004801.1-201ENST00000549557 360 ntBASIC16.44■□□□□ 0.22
TM4SF4P48230 RN7SL602P-201ENST00000578326 324 ntBASIC16.44■□□□□ 0.22
TM4SF4P48230 RN7SL718P-201ENST00000581254 303 ntBASIC16.44■□□□□ 0.22
TM4SF4P48230 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC16.44■□□□□ 0.22
TM4SF4P48230 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC16.44■□□□□ 0.22
TM4SF4P48230 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC16.44■□□□□ 0.22
TM4SF4P48230 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.44■□□□□ 0.22
TM4SF4P48230 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TM4SF4P48230 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.44■□□□□ 0.22
TM4SF4P48230 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TM4SF4P48230 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.43■□□□□ 0.22
TM4SF4P48230 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC16.43■□□□□ 0.22
TM4SF4P48230 EEF1DP5-201ENST00000431410 772 ntBASIC16.43■□□□□ 0.22
TM4SF4P48230 HNRNPA1P2-207ENST00000432375 960 ntBASIC16.43■□□□□ 0.22
TM4SF4P48230 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.43■□□□□ 0.22
TM4SF4P48230 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.43■□□□□ 0.22
TM4SF4P48230 AC092573.1-201ENST00000433054 884 ntBASIC16.43■□□□□ 0.22
TM4SF4P48230 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC16.43■□□□□ 0.22
TM4SF4P48230 STK24P1-201ENST00000455035 1291 ntBASIC16.43■□□□□ 0.22
TM4SF4P48230 AC092903.1-201ENST00000466506 262 ntBASIC16.43■□□□□ 0.22
TM4SF4P48230 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC16.43■□□□□ 0.22
TM4SF4P48230 MIR2278-201ENST00000516344 96 ntBASIC16.43■□□□□ 0.22
TM4SF4P48230 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC16.43■□□□□ 0.22
TM4SF4P48230 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC16.43■□□□□ 0.22
TM4SF4P48230 SRP14-208ENST00000560773 468 ntTSL 3 BASIC16.43■□□□□ 0.22
TM4SF4P48230 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC16.43■□□□□ 0.22
TM4SF4P48230 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.43■□□□□ 0.22
TM4SF4P48230 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC16.43■□□□□ 0.22
TM4SF4P48230 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.43■□□□□ 0.22
TM4SF4P48230 AC090510.3-201ENST00000615831 821 ntBASIC16.43■□□□□ 0.22
TM4SF4P48230 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.43■□□□□ 0.22
TM4SF4P48230 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TM4SF4P48230 AC126365.1-201ENST00000578585 1514 ntBASIC16.43■□□□□ 0.22
TM4SF4P48230 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.43■□□□□ 0.22
TM4SF4P48230 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.43■□□□□ 0.22
TM4SF4P48230 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TM4SF4P48230 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.42■□□□□ 0.22
TM4SF4P48230 LINC02199-201ENST00000506655 2702 ntBASIC16.42■□□□□ 0.22
TM4SF4P48230 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TM4SF4P48230 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TM4SF4P48230 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.42■□□□□ 0.22
TM4SF4P48230 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TM4SF4P48230 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TM4SF4P48230 GOLGA6L16P-201ENST00000441780 1299 ntBASIC16.42■□□□□ 0.22
TM4SF4P48230 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TM4SF4P48230 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TM4SF4P48230 NEK4P3-201ENST00000604859 544 ntBASIC16.42■□□□□ 0.22
TM4SF4P48230 URAHP-205ENST00000610227 398 ntBASIC16.42■□□□□ 0.22
TM4SF4P48230 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.42■□□□□ 0.22
TM4SF4P48230 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.42■□□□□ 0.22
TM4SF4P48230 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms