Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AC105206.1-202ENST00000314927 2368 ntBASIC13.78□□□□□ -0.2
HTR3AP46098 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
HTR3AP46098 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HTR3AP46098 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HTR3AP46098 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 AP006294.1-201ENST00000415407 339 ntBASIC13.78□□□□□ -0.2
HTR3AP46098 KLF2P2-201ENST00000416807 1039 ntBASIC13.78□□□□□ -0.2
HTR3AP46098 GIMAP3P-201ENST00000495150 836 ntBASIC13.78□□□□□ -0.2
HTR3AP46098 AC011495.1-201ENST00000498085 584 ntBASIC13.78□□□□□ -0.2
HTR3AP46098 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.78□□□□□ -0.2
HTR3AP46098 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.78□□□□□ -0.2
HTR3AP46098 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.78□□□□□ -0.2
HTR3AP46098 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HTR3AP46098 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
HTR3AP46098 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HTR3AP46098 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 LRRC59-203ENST00000576448 1531 ntBASIC13.78□□□□□ -0.2
HTR3AP46098 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR3AP46098 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.78□□□□□ -0.2
HTR3AP46098 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 AL157414.3-201ENST00000624276 1954 ntBASIC13.78□□□□□ -0.2
HTR3AP46098 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.78□□□□□ -0.2
HTR3AP46098 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HTR3AP46098 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR3AP46098 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HTR3AP46098 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
HTR3AP46098 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 RNU1-114P-201ENST00000365297 166 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HTR3AP46098 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.77□□□□□ -0.21
HTR3AP46098 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 ACTBP8-201ENST00000403258 1108 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HTR3AP46098 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.77□□□□□ -0.21
HTR3AP46098 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HTR3AP46098 DUX4L47-201ENST00000566374 394 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.77□□□□□ -0.21
HTR3AP46098 AC138761.1-201ENST00000584393 385 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.77□□□□□ -0.21
HTR3AP46098 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 AC097359.2-201ENST00000604992 2389 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 AL137783.1-201ENST00000623494 1896 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 AC011474.4-201ENST00000623523 2076 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 AC005252.2-201ENST00000624630 1141 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.77□□□□□ -0.21
HTR3AP46098 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HTR3AP46098 AL358472.5-202ENST00000641448 1267 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
HTR3AP46098 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.77□□□□□ -0.21
HTR3AP46098 INTS4P1-203ENST00000641008 3683 ntBASIC13.77□□□□□ -0.21
HTR3AP46098 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
HTR3AP46098 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
HTR3AP46098 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
HTR3AP46098 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR3AP46098 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
HTR3AP46098 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms