Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC5P40937 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RFC5P40937 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RFC5P40937 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.33■□□□□ 0.2
RFC5P40937 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
RFC5P40937 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC5P40937 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RFC5P40937 FGD5P1-202ENST00000614866 2498 ntBASIC16.33■□□□□ 0.2
RFC5P40937 FLJ16779-201ENST00000612722 7638 ntBASIC16.33■□□□□ 0.2
RFC5P40937 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.33■□□□□ 0.2
RFC5P40937 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.33■□□□□ 0.2
RFC5P40937 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.32■□□□□ 0.2
RFC5P40937 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RFC5P40937 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RFC5P40937 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.32■□□□□ 0.2
RFC5P40937 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.32■□□□□ 0.2
RFC5P40937 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RFC5P40937 RPL18P13-201ENST00000478088 569 ntBASIC16.32■□□□□ 0.2
RFC5P40937 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.32■□□□□ 0.2
RFC5P40937 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.32■□□□□ 0.2
RFC5P40937 AL133338.1-201ENST00000565695 1517 ntBASIC16.32■□□□□ 0.2
RFC5P40937 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.32■□□□□ 0.2
RFC5P40937 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 AC018529.2-202ENST00000611482 3087 ntBASIC16.32■□□□□ 0.2
RFC5P40937 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.32■□□□□ 0.2
RFC5P40937 AL136295.7-201ENST00000619226 1200 ntBASIC16.32■□□□□ 0.2
RFC5P40937 AC068587.8-201ENST00000641239 219 ntBASIC16.32■□□□□ 0.2
RFC5P40937 AC009093.10-201ENST00000641956 1442 ntBASIC16.32■□□□□ 0.2
RFC5P40937 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.32■□□□□ 0.2
RFC5P40937 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RFC5P40937 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RFC5P40937 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.32■□□□□ 0.2
RFC5P40937 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.31■□□□□ 0.2
RFC5P40937 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 KRT8P28-201ENST00000433288 1390 ntBASIC16.31■□□□□ 0.2
RFC5P40937 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.31■□□□□ 0.2
RFC5P40937 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.31■□□□□ 0.2
RFC5P40937 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.31■□□□□ 0.2
RFC5P40937 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.31■□□□□ 0.2
RFC5P40937 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.31■□□□□ 0.2
RFC5P40937 CALR4P-201ENST00000431943 946 ntBASIC16.31■□□□□ 0.2
RFC5P40937 AL645933.1-201ENST00000440087 609 ntBASIC16.31■□□□□ 0.2
RFC5P40937 EIF4HP1-201ENST00000453115 687 ntBASIC16.31■□□□□ 0.2
RFC5P40937 AC104073.2-201ENST00000453737 312 ntBASIC16.31■□□□□ 0.2
RFC5P40937 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.31■□□□□ 0.2
RFC5P40937 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.31■□□□□ 0.2
RFC5P40937 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.31■□□□□ 0.2
RFC5P40937 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.31■□□□□ 0.2
RFC5P40937 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RFC5P40937 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RFC5P40937 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RFC5P40937 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RFC5P40937 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms