Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC141586.1-203ENST00000567242 366 ntBASIC19.56■□□□□ 0.72
USP6P35125 AC002044.2-201ENST00000624910 970 ntBASIC19.56■□□□□ 0.72
USP6P35125 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC19.56■□□□□ 0.72
USP6P35125 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USP6P35125 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 AC132872.4-202ENST00000622924 2756 ntBASIC19.56■□□□□ 0.72
USP6P35125 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
USP6P35125 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP6P35125 CCT8L1P-201ENST00000465400 1674 ntBASIC19.55■□□□□ 0.72
USP6P35125 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
USP6P35125 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP6P35125 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 TCAF2P1-201ENST00000291129 2421 ntBASIC19.55■□□□□ 0.72
USP6P35125 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC19.55■□□□□ 0.72
USP6P35125 BAK1P1-201ENST00000317045 636 ntBASIC19.55■□□□□ 0.72
USP6P35125 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC19.55■□□□□ 0.72
USP6P35125 AL157792.1-201ENST00000488281 530 ntBASIC19.55■□□□□ 0.72
USP6P35125 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC19.55■□□□□ 0.72
USP6P35125 SKA2-205ENST00000580541 689 ntTSL 3 BASIC19.55■□□□□ 0.72
USP6P35125 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC19.55■□□□□ 0.72
USP6P35125 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
USP6P35125 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
USP6P35125 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 AC215219.1-201ENST00000400706 1817 ntBASIC19.55■□□□□ 0.72
USP6P35125 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP6P35125 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19.54■□□□□ 0.72
USP6P35125 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 STK16-203ENST00000409516 895 ntTSL 2 BASIC19.54■□□□□ 0.72
USP6P35125 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC19.54■□□□□ 0.72
USP6P35125 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC19.54■□□□□ 0.72
USP6P35125 CSNK1G2P1-201ENST00000442675 955 ntBASIC19.54■□□□□ 0.72
USP6P35125 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC19.54■□□□□ 0.72
USP6P35125 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
USP6P35125 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC19.54■□□□□ 0.72
USP6P35125 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
USP6P35125 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC19.54■□□□□ 0.72
USP6P35125 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC19.54■□□□□ 0.72
USP6P35125 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
USP6P35125 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC19.54■□□□□ 0.72
USP6P35125 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP6P35125 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP6P35125 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.54■□□□□ 0.72
USP6P35125 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC19.53■□□□□ 0.72
USP6P35125 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
USP6P35125 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC19.53■□□□□ 0.72
USP6P35125 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC19.53■□□□□ 0.72
USP6P35125 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
USP6P35125 LINC00431-202ENST00000636375 159 ntBASIC19.53■□□□□ 0.72
USP6P35125 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.53■□□□□ 0.72
USP6P35125 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP6P35125 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
USP6P35125 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
USP6P35125 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.53■□□□□ 0.72
USP6P35125 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms