Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.9□□□□□ -0.18
NR4A1P22736 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR4A1P22736 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.9□□□□□ -0.18
NR4A1P22736 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.9□□□□□ -0.18
NR4A1P22736 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.9□□□□□ -0.18
NR4A1P22736 AL590560.3-201ENST00000623350 461 ntBASIC13.9□□□□□ -0.18
NR4A1P22736 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.9□□□□□ -0.18
NR4A1P22736 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR4A1P22736 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR4A1P22736 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.9□□□□□ -0.18
NR4A1P22736 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.9□□□□□ -0.18
NR4A1P22736 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR4A1P22736 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR4A1P22736 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.9□□□□□ -0.18
NR4A1P22736 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR4A1P22736 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
NR4A1P22736 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
NR4A1P22736 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
NR4A1P22736 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
NR4A1P22736 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.9□□□□□ -0.18
NR4A1P22736 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.9□□□□□ -0.19
NR4A1P22736 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.9□□□□□ -0.19
NR4A1P22736 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
NR4A1P22736 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 KRT8P12-202ENST00000472924 1397 ntBASIC13.89□□□□□ -0.19
NR4A1P22736 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 SPDYE17-201ENST00000412399 783 ntBASIC13.89□□□□□ -0.19
NR4A1P22736 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 AL512638.1-201ENST00000457493 794 ntBASIC13.89□□□□□ -0.19
NR4A1P22736 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.89□□□□□ -0.19
NR4A1P22736 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.89□□□□□ -0.19
NR4A1P22736 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.89□□□□□ -0.19
NR4A1P22736 TEX28P1-201ENST00000613479 1221 ntBASIC13.89□□□□□ -0.19
NR4A1P22736 TEX28P2-201ENST00000617764 1221 ntBASIC13.89□□□□□ -0.19
NR4A1P22736 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 AC100757.3-201ENST00000622361 1406 ntBASIC13.89□□□□□ -0.19
NR4A1P22736 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.89□□□□□ -0.19
NR4A1P22736 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
NR4A1P22736 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
NR4A1P22736 MEX3B-202ENST00000558133 4333 ntBASIC13.89□□□□□ -0.19
NR4A1P22736 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.88□□□□□ -0.19
NR4A1P22736 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.88□□□□□ -0.19
NR4A1P22736 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
NR4A1P22736 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 AL136982.4-201ENST00000437689 1740 ntBASIC13.88□□□□□ -0.19
NR4A1P22736 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
NR4A1P22736 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 AC004987.2-201ENST00000395959 1148 ntBASIC13.88□□□□□ -0.19
NR4A1P22736 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.88□□□□□ -0.19
NR4A1P22736 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.88□□□□□ -0.19
NR4A1P22736 AL080243.2-201ENST00000418783 582 ntBASIC13.88□□□□□ -0.19
NR4A1P22736 INGX-202ENST00000489074 768 ntBASIC13.88□□□□□ -0.19
NR4A1P22736 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.88□□□□□ -0.19
NR4A1P22736 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NR4A1P22736 SPCS2P1-201ENST00000561636 679 ntBASIC13.88□□□□□ -0.19
NR4A1P22736 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.88□□□□□ -0.19
NR4A1P22736 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms