Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.63□□□□□ -0.39
USF1P22415 SERPINA13P-202ENST00000478994 924 ntBASIC12.63□□□□□ -0.39
USF1P22415 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC12.63□□□□□ -0.39
USF1P22415 AL391280.1-201ENST00000506969 1062 ntBASIC12.63□□□□□ -0.39
USF1P22415 AC079328.1-201ENST00000560358 952 ntBASIC12.63□□□□□ -0.39
USF1P22415 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC12.63□□□□□ -0.39
USF1P22415 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC12.63□□□□□ -0.39
USF1P22415 AC073413.1-201ENST00000603927 732 ntBASIC12.63□□□□□ -0.39
USF1P22415 AC015967.2-201ENST00000624092 234 ntBASIC12.63□□□□□ -0.39
USF1P22415 AC006435.4-201ENST00000625037 234 ntBASIC12.63□□□□□ -0.39
USF1P22415 AL356737.1-201ENST00000634391 234 ntBASIC12.63□□□□□ -0.39
USF1P22415 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.63□□□□□ -0.39
USF1P22415 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
USF1P22415 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.63□□□□□ -0.39
USF1P22415 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
USF1P22415 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
USF1P22415 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
USF1P22415 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
USF1P22415 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.62□□□□□ -0.39
USF1P22415 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.62□□□□□ -0.39
USF1P22415 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.62□□□□□ -0.39
USF1P22415 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 AL133466.1-201ENST00000447582 150 ntBASIC12.62□□□□□ -0.39
USF1P22415 AC021723.1-201ENST00000486306 515 ntBASIC12.62□□□□□ -0.39
USF1P22415 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 FTLP10-202ENST00000505798 471 ntBASIC12.62□□□□□ -0.39
USF1P22415 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.62□□□□□ -0.39
USF1P22415 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.62□□□□□ -0.39
USF1P22415 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 CU633904.3-201ENST00000624042 1029 ntBASIC12.62□□□□□ -0.39
USF1P22415 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.62□□□□□ -0.39
USF1P22415 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 AC138627.1-207ENST00000641560 1006 ntBASIC12.62□□□□□ -0.39
USF1P22415 ABR-205ENST00000544583 5595 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
USF1P22415 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.62□□□□□ -0.39
USF1P22415 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
USF1P22415 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
USF1P22415 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
USF1P22415 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
USF1P22415 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
USF1P22415 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC12.61□□□□□ -0.39
USF1P22415 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
USF1P22415 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USF1P22415 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
USF1P22415 AC055811.4-201ENST00000624039 1754 ntBASIC12.61□□□□□ -0.39
USF1P22415 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms