Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 AC134312.5-201ENST00000568031 1313 ntBASIC13.82□□□□□ -0.2
UBL4AP11441 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
UBL4AP11441 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
UBL4AP11441 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
UBL4AP11441 INTS4P1-203ENST00000641008 3683 ntBASIC13.82□□□□□ -0.2
UBL4AP11441 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 AC232323.1-201ENST00000540724 2099 ntBASIC13.81□□□□□ -0.2
UBL4AP11441 MTHFR-210ENST00000641407 2387 ntBASIC13.81□□□□□ -0.2
UBL4AP11441 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.81□□□□□ -0.2
UBL4AP11441 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
UBL4AP11441 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC13.81□□□□□ -0.2
UBL4AP11441 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
UBL4AP11441 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 SBF1P1-201ENST00000444527 5631 ntBASIC13.81□□□□□ -0.2
UBL4AP11441 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
UBL4AP11441 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 MSTO2P-201ENST00000314835 1709 ntBASIC13.81□□□□□ -0.2
UBL4AP11441 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.81□□□□□ -0.2
UBL4AP11441 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.81□□□□□ -0.2
UBL4AP11441 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
UBL4AP11441 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.8□□□□□ -0.2
UBL4AP11441 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.8□□□□□ -0.2
UBL4AP11441 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UBL4AP11441 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.8□□□□□ -0.2
UBL4AP11441 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.8□□□□□ -0.2
UBL4AP11441 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.8□□□□□ -0.2
UBL4AP11441 AC007389.4-201ENST00000454674 793 ntBASIC13.8□□□□□ -0.2
UBL4AP11441 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.8□□□□□ -0.2
UBL4AP11441 RN7SL837P-201ENST00000463010 287 ntBASIC13.8□□□□□ -0.2
UBL4AP11441 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
UBL4AP11441 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.8□□□□□ -0.2
UBL4AP11441 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
UBL4AP11441 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
UBL4AP11441 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms