Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.98□□□□□ -0.01
PRAMEF11O60813 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRAMEF11O60813 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRAMEF11O60813 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PRAMEF11O60813 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.98□□□□□ -0.01
PRAMEF11O60813 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AL157407.1-201ENST00000435784 904 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 FAM58BP-201ENST00000439056 645 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 KLF2P1-201ENST00000447438 1042 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 AC005730.2-201ENST00000564549 1184 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 AC104982.3-201ENST00000581995 514 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 MIR6720-201ENST00000611664 98 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 AC091271.1-201ENST00000611877 1162 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 MIR6074-201ENST00000612054 107 ntBASIC14.97□□□□□ -0.01
PRAMEF11O60813 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
PRAMEF11O60813 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PRAMEF11O60813 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 MYO15B-237ENST00000642007 4893 ntBASIC14.96□□□□□ -0.01
PRAMEF11O60813 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 AMT-239ENST00000636865 1914 ntTSL 5 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 BRWD1P1-201ENST00000401091 371 ntBASIC14.96□□□□□ -0.01
PRAMEF11O60813 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.96□□□□□ -0.01
PRAMEF11O60813 ACTBP11-201ENST00000436287 1126 ntBASIC14.96□□□□□ -0.01
PRAMEF11O60813 AC007274.1-201ENST00000439805 662 ntBASIC14.96□□□□□ -0.01
PRAMEF11O60813 AL645933.1-201ENST00000440087 609 ntBASIC14.96□□□□□ -0.01
PRAMEF11O60813 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
PRAMEF11O60813 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PRAMEF11O60813 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
PRAMEF11O60813 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms