Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RIPK2O43353 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RIPK2O43353 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RIPK2O43353 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RIPK2O43353 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.08■□□□□ 0.01
RIPK2O43353 AC114271.1-201ENST00000612689 2813 ntBASIC15.08■□□□□ 0.01
RIPK2O43353 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RIPK2O43353 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RIPK2O43353 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 AC007326.2-201ENST00000624224 7579 ntBASIC15.08■□□□□ 0
RIPK2O43353 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
RIPK2O43353 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RIPK2O43353 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.08■□□□□ 0
RIPK2O43353 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.08■□□□□ 0
RIPK2O43353 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.08■□□□□ 0
RIPK2O43353 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.08■□□□□ 0
RIPK2O43353 AC092865.5-201ENST00000545435 363 ntBASIC15.08■□□□□ 0
RIPK2O43353 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.08■□□□□ 0
RIPK2O43353 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.08■□□□□ 0
RIPK2O43353 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.08■□□□□ 0
RIPK2O43353 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RIPK2O43353 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RIPK2O43353 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.08■□□□□ 0
RIPK2O43353 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.08■□□□□ 0
RIPK2O43353 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.08■□□□□ 0
RIPK2O43353 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 MRPL37P1-201ENST00000592451 1337 ntBASIC15.08■□□□□ 0
RIPK2O43353 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC15.08■□□□□ 0
RIPK2O43353 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.08■□□□□ 0
RIPK2O43353 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC15.08■□□□□ 0
RIPK2O43353 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.08■□□□□ 0
RIPK2O43353 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RIPK2O43353 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
RIPK2O43353 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.07■□□□□ 0
RIPK2O43353 C8orf49-201ENST00000525043 1968 ntBASIC15.07■□□□□ 0
RIPK2O43353 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.07■□□□□ 0
RIPK2O43353 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RIPK2O43353 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RIPK2O43353 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.07■□□□□ 0
RIPK2O43353 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.07■□□□□ 0
RIPK2O43353 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RIPK2O43353 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.07■□□□□ 0
RIPK2O43353 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.07■□□□□ 0
RIPK2O43353 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.07■□□□□ 0
RIPK2O43353 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.07■□□□□ 0
RIPK2O43353 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.07■□□□□ 0
RIPK2O43353 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RIPK2O43353 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.07■□□□□ 0
RIPK2O43353 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.07■□□□□ 0
RIPK2O43353 AL049840.4-201ENST00000602422 811 ntBASIC15.07■□□□□ 0
RIPK2O43353 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.07■□□□□ 0
RIPK2O43353 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC15.07■□□□□ 0
RIPK2O43353 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.07■□□□□ 0
RIPK2O43353 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.07■□□□□ 0
RIPK2O43353 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms