Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 MIR3147-201ENST00000577811 66 ntBASIC17.1■□□□□ 0.33
USP17L11C9JVI0 AC018635.2-201ENST00000608625 364 ntBASIC17.1■□□□□ 0.33
USP17L11C9JVI0 AL157813.1-201ENST00000612996 587 ntBASIC17.1■□□□□ 0.33
USP17L11C9JVI0 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
USP17L11C9JVI0 AC007292.2-201ENST00000593524 1812 ntBASIC17.1■□□□□ 0.33
USP17L11C9JVI0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 RN7SL258P-201ENST00000478664 300 ntBASIC17.09■□□□□ 0.33
USP17L11C9JVI0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 AC133540.1-201ENST00000620845 1019 ntBASIC17.09■□□□□ 0.33
USP17L11C9JVI0 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
USP17L11C9JVI0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.08■□□□□ 0.33
USP17L11C9JVI0 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 CYP4F23P-201ENST00000593402 1579 ntBASIC17.08■□□□□ 0.32
USP17L11C9JVI0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 AC092978.1-202ENST00000637590 1327 ntBASIC17.08■□□□□ 0.32
USP17L11C9JVI0 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 FGFR3P1-201ENST00000449999 601 ntBASIC17.08■□□□□ 0.32
USP17L11C9JVI0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.08■□□□□ 0.32
USP17L11C9JVI0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms