Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM49D1C9J1S8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM49D1C9J1S8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM49D1C9J1S8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 AL136172.1-201ENST00000598590 1394 ntBASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 RNU1-114P-201ENST00000365297 166 ntBASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 TMEM198B-204ENST00000484016 896 ntBASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 AC022616.1-201ENST00000518688 554 ntBASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 AC093028.1-201ENST00000622998 982 ntBASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 AC105206.1-202ENST00000314927 2368 ntBASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.91□□□□□ -0.02
TRIM49D1C9J1S8 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AC007969.1-201ENST00000433675 447 ntBASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 RPL13AP25-201ENST00000484130 612 ntBASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 SPDYE22P-201ENST00000582158 798 ntBASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AC004790.1-201ENST00000612686 536 ntBASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AC011840.2-201ENST00000563063 1520 ntBASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRIM49D1C9J1S8 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM49D1C9J1S8 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM49D1C9J1S8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRIM49D1C9J1S8 AC003102.2-201ENST00000589195 1469 ntBASIC14.89□□□□□ -0.03
TRIM49D1C9J1S8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRIM49D1C9J1S8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.89□□□□□ -0.03
TRIM49D1C9J1S8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms