Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 AC073869.4-201ENST00000620841 800 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 AC019109.1-201ENST00000401725 1874 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 ODCP-201ENST00000459650 1639 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 PCDHA12-202ENST00000613593 2588 ntBASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM88BA6NKF7 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 MIR611-201ENST00000384869 67 ntBASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 HNRNPA1P25-201ENST00000422644 937 ntBASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 KRT18P62-201ENST00000446618 1287 ntBASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 TPT1P6-201ENST00000458298 514 ntBASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 AC011431.1-201ENST00000512971 230 ntBASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 HCG18-241ENST00000602290 821 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 PRMT1P1-201ENST00000604252 1009 ntBASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 AL137077.2-201ENST00000635124 1608 ntBASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 PCDHB19P-201ENST00000570871 2371 ntBASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM88BA6NKF7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 SIRPB3P-201ENST00000340424 1216 ntBASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 GYG2-201ENST00000353656 1293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 LINC00265-2P-201ENST00000413372 782 ntBASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AC006987.1-201ENST00000413610 527 ntBASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 RN7SL788P-201ENST00000460504 316 ntBASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 ISL1-203ENST00000511384 981 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 ACY3-202ENST00000529256 933 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 BMF-206ENST00000558774 671 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AL591424.3-201ENST00000614278 872 ntBASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AC091769.1-201ENST00000619576 568 ntBASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AC090386.2-201ENST00000623010 1039 ntBASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM88BA6NKF7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms