Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AC004835.2-201ENST00000603762 682 ntBASIC12.73□□□□□ -0.37
TMEM235A6NFC5 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AP001059.3-201ENST00000619053 235 ntBASIC12.73□□□□□ -0.37
TMEM235A6NFC5 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 FAM90A12P-201ENST00000519497 2375 ntBASIC12.73□□□□□ -0.37
TMEM235A6NFC5 FAM90A24P-201ENST00000520792 2369 ntBASIC12.73□□□□□ -0.37
TMEM235A6NFC5 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TMEM235A6NFC5 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.73□□□□□ -0.37
TMEM235A6NFC5 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 AC023141.5-201ENST00000458585 616 ntBASIC12.72□□□□□ -0.37
TMEM235A6NFC5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 SDHAP3-202ENST00000515467 728 ntBASIC12.72□□□□□ -0.37
TMEM235A6NFC5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 KRT18P58-201ENST00000527480 1120 ntBASIC12.72□□□□□ -0.37
TMEM235A6NFC5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 TEX28P1-201ENST00000613479 1221 ntBASIC12.72□□□□□ -0.37
TMEM235A6NFC5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 TEX28P2-201ENST00000617764 1221 ntBASIC12.72□□□□□ -0.37
TMEM235A6NFC5 SPDYE12P-201ENST00000618416 771 ntBASIC12.72□□□□□ -0.37
TMEM235A6NFC5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.72□□□□□ -0.37
TMEM235A6NFC5 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms