Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.75□□□□□ -0.21
NPIPA1Q9UND3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 AC013726.1-201ENST00000563747 2285 ntBASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 PPY2P-201ENST00000582808 702 ntBASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
NPIPA1Q9UND3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 ACE3P-201ENST00000423435 1973 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC104457.1-201ENST00000401024 814 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 AC079178.1-201ENST00000420915 656 ntBASIC13.73□□□□□ -0.21
NPIPA1Q9UND3 CALR4P-201ENST00000431943 946 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms