Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 SPTLC1P5-201ENST00000450718 252 ntBASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AC093752.3-201ENST00000567343 901 ntBASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AL022334.2-201ENST00000610000 484 ntBASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AL022313.4-201ENST00000562756 2046 ntBASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.62■□□□□ 0.73
NPC1L1Q9UHC9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 NME6-203ENST00000415644 849 ntTSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 ACTG1P2-201ENST00000415776 1125 ntBASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 ACTG1P11-201ENST00000425411 1125 ntBASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 RN7SL774P-201ENST00000577467 290 ntBASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 CCT8L1P-201ENST00000465400 1674 ntBASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 AC005089.1-201ENST00000619486 2241 ntBASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.61■□□□□ 0.73
NPC1L1Q9UHC9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 ISCA2P1-201ENST00000425548 448 ntBASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 MIR3619-201ENST00000579667 83 ntBASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC19.6■□□□□ 0.73
NPC1L1Q9UHC9 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPC1L1Q9UHC9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms