Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 AC020907.1-201ENST00000616460 1350 ntBASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLIP2Q9UDT6 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ZNF767P-206ENST00000513792 565 ntBASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ZACNP1-201ENST00000612259 710 ntBASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 AC005695.3-201ENST00000614522 232 ntBASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLIP2Q9UDT6 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 AC117489.1-201ENST00000625169 3217 ntBASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 CHMP1AP1-201ENST00000445563 662 ntBASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 AC244093.1-201ENST00000610837 814 ntBASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 AC244157.2-201ENST00000616239 1006 ntBASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLIP2Q9UDT6 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLIP2Q9UDT6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms