Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 ANKRD19P-201ENST00000338192 862 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 POR-201ENST00000394893 2532 ntTSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 CD8B2-202ENST00000417670 633 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 FO681548.1-201ENST00000455617 1132 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 AL590640.2-201ENST00000457038 527 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 AC078819.1-201ENST00000547454 765 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 AC012085.1-201ENST00000548270 765 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 ECM1P1-201ENST00000604092 1279 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 RHOXF1P1-202ENST00000635473 501 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
GCM1Q9NP62 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 AL009178.2-201ENST00000597278 2719 ntBASIC12.75□□□□□ -0.37
GCM1Q9NP62 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
GCM1Q9NP62 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC023090.2-201ENST00000625182 2110 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC006001.1-201ENST00000325130 474 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 MIR658-201ENST00000385210 100 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 POM121L8P-201ENST00000417732 1281 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 POM121L9P-203ENST00000441984 1285 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC079316.1-201ENST00000548397 411 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC004466.1-201ENST00000599515 1080 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC133552.6-201ENST00000613406 534 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC006453.4-201ENST00000636949 1252 ntBASIC12.74□□□□□ -0.37
GCM1Q9NP62 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
GCM1Q9NP62 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
GCM1Q9NP62 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms