Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNU6-255P-201ENST00000516957 105 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 SMARCE1P4-201ENST00000523647 241 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 MTND1P35-201ENST00000526739 508 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AC068790.1-201ENST00000536166 355 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AC007424.1-203ENST00000554613 687 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 C1orf186-203ENST00000582070 1145 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNF569-208ENST00000592490 579 ntTSL 3 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNF563-203ENST00000595977 958 ntTSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 BNIP3P23-201ENST00000599655 511 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 NRBF2P5-201ENST00000603087 788 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AL109983.1-201ENST00000603234 646 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AL033381.2-201ENST00000603854 732 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 WISP3-208ENST00000604763 1250 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 PDZRN3-AS1-202ENST00000608304 774 ntTSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AC120349.2-201ENST00000625002 298 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AC006065.6-201ENST00000625201 545 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AC092329.4-210ENST00000639997 752 ntTSL 3 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 HADHAP1-201ENST00000514498 2284 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 PPIL4-201ENST00000253329 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 LIN52-205ENST00000555028 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AL161938.1-201ENST00000569833 2180 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 AL096828.2-201ENST00000567259 1965 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 ACP1-202ENST00000272067 1552 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 CDY22P-201ENST00000451423 1554 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 KNOP1P5-201ENST00000358374 1378 ntBASIC9.63□□□□□ -0.87
KRTAP3-3Q9BYR6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC010207.1-201ENST00000568384 1946 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AL049812.1-201ENST00000432563 2267 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 XIAPP2-201ENST00000527404 1852 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 IL7-210ENST00000541183 2020 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 RCL1-202ENST00000381730 801 ntTSL 3 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 RPS24P12-201ENST00000402084 394 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 SNORA81-201ENST00000408493 178 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 Z68694.1-201ENST00000413929 841 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 HNRNPA1P66-201ENST00000416539 934 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC245884.5-201ENST00000417373 170 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 SLC44A3-AS1-205ENST00000424505 612 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 MTCO1P20-201ENST00000425366 358 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 DNAJA1P6-201ENST00000437347 354 ntBASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC9.62□□□□□ -0.87
KRTAP3-3Q9BYR6 AC104634.1-201ENST00000452720 462 ntBASIC9.62□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms