Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.45□□□□□ -0.42
SSBP3Q9BWW4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 MIR4525-201ENST00000580000 75 ntBASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 MIR4538-201ENST00000581377 78 ntBASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AL023775.1-201ENST00000454907 1746 ntBASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AP000593.2-201ENST00000542775 1433 ntBASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 PTENP1-202ENST00000532280 3996 ntBASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
SSBP3Q9BWW4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.43□□□□□ -0.42
SSBP3Q9BWW4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms