Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.49□□□□□ -0.25
USB1Q9BQ65 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
USB1Q9BQ65 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 AC023157.3-201ENST00000619086 2088 ntBASIC13.48□□□□□ -0.25
USB1Q9BQ65 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 MIR658-201ENST00000385210 100 ntBASIC13.48□□□□□ -0.25
USB1Q9BQ65 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 RPL7P3-201ENST00000441388 714 ntBASIC13.48□□□□□ -0.25
USB1Q9BQ65 KRT223P-202ENST00000449164 1292 ntBASIC13.48□□□□□ -0.25
USB1Q9BQ65 AC007551.1-201ENST00000457394 519 ntBASIC13.48□□□□□ -0.25
USB1Q9BQ65 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 AP001582.1-201ENST00000525856 295 ntBASIC13.48□□□□□ -0.25
USB1Q9BQ65 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 AC084364.1-201ENST00000551967 1556 ntBASIC13.48□□□□□ -0.25
USB1Q9BQ65 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.48□□□□□ -0.25
USB1Q9BQ65 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
USB1Q9BQ65 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 AC011700.1-201ENST00000610409 2627 ntBASIC13.47□□□□□ -0.25
USB1Q9BQ65 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 AC092933.1-201ENST00000393644 945 ntBASIC13.47□□□□□ -0.25
USB1Q9BQ65 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 AC019070.1-201ENST00000415008 1024 ntBASIC13.47□□□□□ -0.25
USB1Q9BQ65 TMEM14DP-201ENST00000422205 345 ntBASIC13.47□□□□□ -0.25
USB1Q9BQ65 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
USB1Q9BQ65 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 RNU6-751P-201ENST00000516382 101 ntBASIC13.47□□□□□ -0.25
USB1Q9BQ65 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 AL158211.1-201ENST00000566763 763 ntBASIC13.47□□□□□ -0.25
USB1Q9BQ65 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
USB1Q9BQ65 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms