Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC097493.3-201ENST00000509725 367 ntBASIC14.34□□□□□ -0.11
VPS33AQ96AX1 SPDYE18-201ENST00000510091 1050 ntBASIC14.34□□□□□ -0.11
VPS33AQ96AX1 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC140878.1-201ENST00000565277 250 ntBASIC14.34□□□□□ -0.11
VPS33AQ96AX1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AL590560.3-201ENST00000623350 461 ntBASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 CICP17-201ENST00000418553 2377 ntBASIC14.34□□□□□ -0.11
VPS33AQ96AX1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC090505.1-201ENST00000430515 1834 ntBASIC14.34□□□□□ -0.11
VPS33AQ96AX1 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VPS33AQ96AX1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
VPS33AQ96AX1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
VPS33AQ96AX1 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.32□□□□□ -0.12
VPS33AQ96AX1 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 KRT18P13-201ENST00000400056 1290 ntBASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 TREML5P-201ENST00000421694 576 ntBASIC14.32□□□□□ -0.12
VPS33AQ96AX1 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.32□□□□□ -0.12
VPS33AQ96AX1 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms