Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.13□□□□□ -0.31
AP3S1Q92572 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
AP3S1Q92572 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
AP3S1Q92572 AC118758.2-201ENST00000614242 2813 ntBASIC13.12□□□□□ -0.31
AP3S1Q92572 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
AP3S1Q92572 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 MYADML-201ENST00000474610 2147 ntBASIC13.12□□□□□ -0.31
AP3S1Q92572 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.12□□□□□ -0.31
AP3S1Q92572 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
AP3S1Q92572 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
AP3S1Q92572 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 KRT18P67-201ENST00000432816 1264 ntBASIC13.12□□□□□ -0.31
AP3S1Q92572 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S1Q92572 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
AP3S1Q92572 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.12□□□□□ -0.31
AP3S1Q92572 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.12□□□□□ -0.31
AP3S1Q92572 PRELID1P1-202ENST00000567272 903 ntBASIC13.12□□□□□ -0.31
AP3S1Q92572 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S1Q92572 AC099522.2-201ENST00000607001 744 ntBASIC13.12□□□□□ -0.31
AP3S1Q92572 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S1Q92572 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
AP3S1Q92572 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.12□□□□□ -0.31
AP3S1Q92572 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.12□□□□□ -0.31
AP3S1Q92572 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S1Q92572 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
AP3S1Q92572 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.12□□□□□ -0.31
AP3S1Q92572 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.12□□□□□ -0.31
AP3S1Q92572 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
AP3S1Q92572 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
AP3S1Q92572 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.11□□□□□ -0.31
AP3S1Q92572 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
AP3S1Q92572 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
AP3S1Q92572 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
AP3S1Q92572 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
AP3S1Q92572 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
AP3S1Q92572 FAM197Y8-203ENST00000450145 560 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 KRT18P43-201ENST00000469825 1281 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 RN7SL589P-201ENST00000481268 310 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 AL135744.1-201ENST00000565098 629 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.11□□□□□ -0.31
AP3S1Q92572 AC106730.1-201ENST00000566722 1090 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 AP000842.3-202ENST00000569238 1080 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 AP002472.1-201ENST00000577490 586 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 AL358472.4-201ENST00000633140 710 ntBASIC13.11□□□□□ -0.31
AP3S1Q92572 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
AP3S1Q92572 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
AP3S1Q92572 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
AP3S1Q92572 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
AP3S1Q92572 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms