Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 ACKR1-201ENST00000368121 1240 ntBASIC15.19■□□□□ 0.02
PTCD2Q8WV60 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AL022319.1-201ENST00000458183 1167 ntBASIC15.19■□□□□ 0.02
PTCD2Q8WV60 TPT1P11-201ENST00000458482 498 ntBASIC15.19■□□□□ 0.02
PTCD2Q8WV60 HAUS1P1-201ENST00000505275 832 ntBASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AC114322.1-201ENST00000506771 926 ntBASIC15.19■□□□□ 0.02
PTCD2Q8WV60 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 HERC2P4-202ENST00000564145 683 ntTSL 3 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 AL359881.2-201ENST00000602973 570 ntBASIC15.19■□□□□ 0.02
PTCD2Q8WV60 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.19■□□□□ 0.02
PTCD2Q8WV60 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 RNU1-114P-201ENST00000365297 166 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 AC005229.1-201ENST00000392885 409 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 KLF2P2-201ENST00000416807 1039 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 MTCYBP15-201ENST00000433123 1127 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 AC234783.1-201ENST00000441761 496 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 AC114495.2-201ENST00000452686 437 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 FTH1P14-201ENST00000482930 551 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 AC022137.2-201ENST00000503482 481 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 AC009486.1-201ENST00000569860 813 ntBASIC15.18■□□□□ 0.02
PTCD2Q8WV60 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
PTCD2Q8WV60 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PTCD2Q8WV60 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms