Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 AHCYP4-201ENST00000419201 1315 ntBASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TNRC6AQ8NDV7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC13.33□□□□□ -0.27
TNRC6AQ8NDV7 LINC00554-201ENST00000564841 3011 ntBASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AGAP7P-201ENST00000582299 2062 ntBASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AGAP14-201ENST00000624701 2060 ntBASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TNRC6AQ8NDV7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 REEP5-205ENST00000504247 480 ntTSL 5 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 AC114947.1-202ENST00000514136 344 ntBASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 AC006158.1-201ENST00000610661 249 ntBASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TNRC6AQ8NDV7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms