Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AC243960.2-201ENST00000600996 747 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 AL451050.2-201ENST00000606967 682 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 MIR6787-201ENST00000616675 61 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 GPR182-203ENST00000622922 591 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 AC113367.3-201ENST00000508316 1912 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 MBLAC2-202ENST00000514906 1936 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 FAM90A7P-201ENST00000382628 1395 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 FAM90A23P-201ENST00000400136 1395 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 AC015688.4-201ENST00000580780 1647 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 MYADML-201ENST00000474610 2147 ntBASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
ARHGEF39Q8N4T4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 BX284668.4-201ENST00000453917 508 ntBASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 TPT1P11-201ENST00000458482 498 ntBASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AC021723.1-201ENST00000486306 515 ntBASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AP001258.2-201ENST00000529891 490 ntBASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 MIR3615-201ENST00000581999 87 ntBASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AC004923.1-202ENST00000642106 209 ntBASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AC007326.2-201ENST00000624224 7579 ntBASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 CYP4F23P-201ENST00000593402 1579 ntBASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
ARHGEF39Q8N4T4 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 AC140479.7-201ENST00000636301 2332 ntBASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
ARHGEF39Q8N4T4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms