Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 FAM86GP-201ENST00000448322 971 ntBASIC13.5□□□□□ -0.25
SHFQ7M4L6 MEIS3P1-201ENST00000495167 958 ntBASIC13.5□□□□□ -0.25
SHFQ7M4L6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AL844908.2-201ENST00000609461 460 ntBASIC13.5□□□□□ -0.25
SHFQ7M4L6 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 AC005562.1-201ENST00000583030 3219 ntBASIC13.5□□□□□ -0.25
SHFQ7M4L6 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SHFQ7M4L6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SHFQ7M4L6 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 AC100757.3-201ENST00000622361 1406 ntBASIC13.49□□□□□ -0.25
SHFQ7M4L6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 HLA-K-203ENST00000430151 1046 ntBASIC13.49□□□□□ -0.25
SHFQ7M4L6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 AC097493.3-201ENST00000509725 367 ntBASIC13.49□□□□□ -0.25
SHFQ7M4L6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.49□□□□□ -0.25
SHFQ7M4L6 AL590560.3-201ENST00000623350 461 ntBASIC13.49□□□□□ -0.25
SHFQ7M4L6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SHFQ7M4L6 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms