Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 AC044849.1-201ENST00000519737 1188 ntBASIC17.6■□□□□ 0.41
CTR9Q6PD62 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.6■□□□□ 0.41
CTR9Q6PD62 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 AC100827.2-201ENST00000563214 1194 ntBASIC17.6■□□□□ 0.41
CTR9Q6PD62 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 AC005324.6-201ENST00000587972 613 ntBASIC17.6■□□□□ 0.41
CTR9Q6PD62 BNIP3P13-201ENST00000599968 566 ntBASIC17.6■□□□□ 0.41
CTR9Q6PD62 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 AC244394.1-201ENST00000435000 1665 ntBASIC17.6■□□□□ 0.41
CTR9Q6PD62 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.6■□□□□ 0.41
CTR9Q6PD62 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTR9Q6PD62 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 MRPL37P1-201ENST00000592451 1337 ntBASIC17.59■□□□□ 0.41
CTR9Q6PD62 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 AC027601.3-201ENST00000622907 509 ntBASIC17.59■□□□□ 0.41
CTR9Q6PD62 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTR9Q6PD62 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.59■□□□□ 0.41
CTR9Q6PD62 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC17.59■□□□□ 0.41
CTR9Q6PD62 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTR9Q6PD62 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
CTR9Q6PD62 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTR9Q6PD62 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC17.58■□□□□ 0.41
CTR9Q6PD62 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTR9Q6PD62 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTR9Q6PD62 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTR9Q6PD62 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTR9Q6PD62 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CTR9Q6PD62 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTR9Q6PD62 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTR9Q6PD62 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.58■□□□□ 0.41
CTR9Q6PD62 AL136172.1-201ENST00000598590 1394 ntBASIC17.58■□□□□ 0.4
CTR9Q6PD62 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 AC091804.1-201ENST00000486888 567 ntBASIC17.58■□□□□ 0.4
CTR9Q6PD62 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTR9Q6PD62 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 AL023803.2-201ENST00000620080 638 ntBASIC17.58■□□□□ 0.4
CTR9Q6PD62 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CTR9Q6PD62 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.58■□□□□ 0.4
CTR9Q6PD62 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms