Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 ISCA2P1-201ENST00000425548 448 ntBASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 AC006335.1-201ENST00000445200 547 ntBASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC62Q6P9F0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 AC007274.2-201ENST00000421675 662 ntBASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 PDIA3P2-201ENST00000428073 158 ntBASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 AC020922.3-201ENST00000595064 547 ntBASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 AL353770.1-201ENST00000614915 403 ntBASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC62Q6P9F0 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AC078875.1-201ENST00000431907 724 ntBASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AL035414.1-201ENST00000451327 857 ntBASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 AC128714.1-201ENST00000637035 887 ntBASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CCDC62Q6P9F0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms