Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PRMT1P1-201ENST00000604252 1009 ntBASIC14.13□□□□□ -0.15
RIF1Q5UIP0 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC14.13□□□□□ -0.15
RIF1Q5UIP0 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC14.13□□□□□ -0.15
RIF1Q5UIP0 AC010531.8-201ENST00000623341 685 ntBASIC14.13□□□□□ -0.15
RIF1Q5UIP0 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RIF1Q5UIP0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RIF1Q5UIP0 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 GCOM2-201ENST00000509133 1104 ntBASIC14.12□□□□□ -0.15
RIF1Q5UIP0 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 ABCC6P1-203ENST00000565566 1170 ntBASIC14.12□□□□□ -0.15
RIF1Q5UIP0 AP001462.1-201ENST00000594089 452 ntBASIC14.12□□□□□ -0.15
RIF1Q5UIP0 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RIF1Q5UIP0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 OR52M2P-201ENST00000414298 959 ntBASIC14.11□□□□□ -0.15
RIF1Q5UIP0 AL080243.1-201ENST00000423293 1060 ntBASIC14.11□□□□□ -0.15
RIF1Q5UIP0 IFNWP2-201ENST00000431203 580 ntBASIC14.11□□□□□ -0.15
RIF1Q5UIP0 AC008494.1-201ENST00000497612 796 ntBASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 NAT9-204ENST00000578822 839 ntTSL 3 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.11□□□□□ -0.15
RIF1Q5UIP0 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms