Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 AL133466.1-201ENST00000447582 150 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 SCARNA21-201ENST00000517026 139 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 AC024681.1-201ENST00000521917 487 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 AC019227.1-201ENST00000526902 510 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 AL132994.2-201ENST00000603120 687 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 AP000280.1-201ENST00000624800 832 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.73■□□□□ 0.11
VARS2Q5ST30 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 FAM90A7P-201ENST00000382628 1395 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 FAM90A23P-201ENST00000400136 1395 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 CICP23-201ENST00000605013 2741 ntBASIC15.73■□□□□ 0.11
VARS2Q5ST30 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VARS2Q5ST30 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 AL157407.1-201ENST00000435784 904 ntBASIC15.72■□□□□ 0.11
VARS2Q5ST30 AL035414.1-201ENST00000451327 857 ntBASIC15.72■□□□□ 0.11
VARS2Q5ST30 IMP3P2-201ENST00000489760 475 ntBASIC15.72■□□□□ 0.11
VARS2Q5ST30 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 AC009779.1-201ENST00000551138 283 ntBASIC15.72■□□□□ 0.11
VARS2Q5ST30 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 AC063950.1-202ENST00000600133 568 ntBASIC15.72■□□□□ 0.11
VARS2Q5ST30 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 AL157791.1-201ENST00000553667 1699 ntBASIC15.72■□□□□ 0.11
VARS2Q5ST30 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 AC136759.1-202ENST00000530858 2194 ntBASIC15.72■□□□□ 0.11
VARS2Q5ST30 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.72■□□□□ 0.11
VARS2Q5ST30 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VARS2Q5ST30 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 MFSD8-213ENST00000641134 1327 ntBASIC15.71■□□□□ 0.11
VARS2Q5ST30 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AC006486.2-201ENST00000624246 2199 ntBASIC15.71■□□□□ 0.11
VARS2Q5ST30 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 RN7SKP214-201ENST00000364208 315 ntBASIC15.71■□□□□ 0.11
VARS2Q5ST30 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VARS2Q5ST30 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.71■□□□□ 0.11
VARS2Q5ST30 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.71■□□□□ 0.11
VARS2Q5ST30 AL645933.1-201ENST00000440087 609 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms