Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CTC1Q2NKJ3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 AGAP7P-201ENST00000582299 2062 ntBASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 AGAP14-201ENST00000624701 2060 ntBASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 MTATP6P19-201ENST00000413797 659 ntBASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 RPL7P35-201ENST00000446943 740 ntBASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 POU5F1P2-201ENST00000521750 823 ntBASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 AC138894.2-201ENST00000602838 371 ntBASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 AC009084.3-201ENST00000623356 437 ntBASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 AC092127.1-201ENST00000567093 3455 ntBASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.84■□□□□ 0.13
CTC1Q2NKJ3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
CTC1Q2NKJ3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CTC1Q2NKJ3 AC084364.1-201ENST00000551967 1556 ntBASIC15.83■□□□□ 0.13
CTC1Q2NKJ3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CTC1Q2NKJ3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
CTC1Q2NKJ3 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CTC1Q2NKJ3 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CTC1Q2NKJ3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CTC1Q2NKJ3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 HLA-K-203ENST00000430151 1046 ntBASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 RN7SL258P-201ENST00000478664 300 ntBASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 AC002472.3-201ENST00000640124 621 ntBASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTC1Q2NKJ3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTC1Q2NKJ3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms