Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.04□□□□□ -0.48
CX3CL1P78423 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CX3CL1P78423 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CX3CL1P78423 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
CX3CL1P78423 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 AC107918.4-201ENST00000641966 3141 ntBASIC12.03□□□□□ -0.48
CX3CL1P78423 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 SF1-209ENST00000433274 2317 ntTSL 2 BASIC12.03□□□□□ -0.48
CX3CL1P78423 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.03□□□□□ -0.48
CX3CL1P78423 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.03□□□□□ -0.48
CX3CL1P78423 ACTBP8-201ENST00000403258 1108 ntBASIC12.03□□□□□ -0.48
CX3CL1P78423 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.03□□□□□ -0.48
CX3CL1P78423 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.03□□□□□ -0.48
CX3CL1P78423 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.03□□□□□ -0.48
CX3CL1P78423 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
CX3CL1P78423 TDH-203ENST00000531764 1110 ntBASIC12.03□□□□□ -0.48
CX3CL1P78423 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.03□□□□□ -0.48
CX3CL1P78423 PTP4A1P2-201ENST00000546033 454 ntBASIC12.03□□□□□ -0.48
CX3CL1P78423 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.03□□□□□ -0.48
CX3CL1P78423 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.03□□□□□ -0.48
CX3CL1P78423 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
CX3CL1P78423 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.03□□□□□ -0.48
CX3CL1P78423 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
CX3CL1P78423 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 KRT8P35-201ENST00000483942 1338 ntBASIC12.03□□□□□ -0.48
CX3CL1P78423 MBLAC2-202ENST00000514906 1936 ntBASIC12.03□□□□□ -0.48
CX3CL1P78423 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
CX3CL1P78423 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.03□□□□□ -0.48
CX3CL1P78423 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CX3CL1P78423 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.03□□□□□ -0.48
CX3CL1P78423 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.03□□□□□ -0.48
CX3CL1P78423 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.03□□□□□ -0.48
CX3CL1P78423 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CX3CL1P78423 AC087386.2-201ENST00000623212 4637 ntBASIC12.03□□□□□ -0.48
CX3CL1P78423 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.02□□□□□ -0.48
CX3CL1P78423 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.02□□□□□ -0.48
CX3CL1P78423 AL928921.2-201ENST00000641325 2442 ntBASIC12.02□□□□□ -0.48
CX3CL1P78423 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.02□□□□□ -0.48
CX3CL1P78423 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.02□□□□□ -0.48
CX3CL1P78423 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
CX3CL1P78423 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.02□□□□□ -0.48
CX3CL1P78423 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.02□□□□□ -0.48
CX3CL1P78423 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
CX3CL1P78423 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.02□□□□□ -0.48
CX3CL1P78423 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC12.02□□□□□ -0.48
CX3CL1P78423 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
CX3CL1P78423 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.02□□□□□ -0.48
CX3CL1P78423 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.02□□□□□ -0.48
CX3CL1P78423 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
CX3CL1P78423 PTENP1-202ENST00000532280 3996 ntBASIC12.02□□□□□ -0.48
CX3CL1P78423 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
CX3CL1P78423 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
CX3CL1P78423 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.02□□□□□ -0.49
CX3CL1P78423 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CX3CL1P78423 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CX3CL1P78423 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CX3CL1P78423 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CX3CL1P78423 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CX3CL1P78423 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CX3CL1P78423 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
CX3CL1P78423 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.02□□□□□ -0.49
CX3CL1P78423 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CX3CL1P78423 BAATP1-201ENST00000412284 1225 ntBASIC12.02□□□□□ -0.49
CX3CL1P78423 RN7SL837P-201ENST00000463010 287 ntBASIC12.02□□□□□ -0.49
CX3CL1P78423 GIMAP3P-201ENST00000495150 836 ntBASIC12.02□□□□□ -0.49
CX3CL1P78423 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.02□□□□□ -0.49
CX3CL1P78423 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
CX3CL1P78423 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
CX3CL1P78423 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.02□□□□□ -0.49
CX3CL1P78423 DUX4L47-201ENST00000566374 394 ntBASIC12.02□□□□□ -0.49
CX3CL1P78423 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms