Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 MYADML-201ENST00000474610 2147 ntBASIC11.14□□□□□ -0.63
HIST1H2BDP58876 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
HIST1H2BDP58876 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 AC087164.2-201ENST00000624514 3130 ntBASIC11.13□□□□□ -0.63
HIST1H2BDP58876 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 KRT8P37-201ENST00000451609 1420 ntBASIC11.13□□□□□ -0.63
HIST1H2BDP58876 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 APBB1-223ENST00000618005 2107 ntTSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 PKP4P1-201ENST00000426801 2158 ntBASIC11.13□□□□□ -0.63
HIST1H2BDP58876 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
HIST1H2BDP58876 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 NTM-206ENST00000427481 2583 ntTSL 5 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
HIST1H2BDP58876 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.12□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms