Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RIPK4P57078 KRT8P28-201ENST00000433288 1390 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 AC020907.1-201ENST00000616460 1350 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RIPK4P57078 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RIPK4P57078 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RIPK4P57078 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.34■□□□□ 0.69
RIPK4P57078 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 MIR1247-201ENST00000408206 136 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.34■□□□□ 0.69
RIPK4P57078 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.34■□□□□ 0.69
RIPK4P57078 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.34■□□□□ 0.69
RIPK4P57078 AL157407.1-201ENST00000435784 904 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.34■□□□□ 0.69
RIPK4P57078 SERPINA13P-202ENST00000478994 924 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC19.34■□□□□ 0.69
RIPK4P57078 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.34■□□□□ 0.69
RIPK4P57078 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.34■□□□□ 0.69
RIPK4P57078 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 BNIP3P13-201ENST00000599968 566 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 AL023803.2-201ENST00000620080 638 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RIPK4P57078 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.34■□□□□ 0.69
RIPK4P57078 KHSRPP1-201ENST00000427983 1768 ntBASIC19.34■□□□□ 0.69
RIPK4P57078 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RIPK4P57078 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RIPK4P57078 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RIPK4P57078 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RIPK4P57078 AL008718.2-201ENST00000609206 1313 ntBASIC19.33■□□□□ 0.69
RIPK4P57078 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RIPK4P57078 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RIPK4P57078 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC19.33■□□□□ 0.68
RIPK4P57078 GPAA1P2-201ENST00000417923 928 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC19.33■□□□□ 0.68
RIPK4P57078 NKAIN1P1-201ENST00000435754 582 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 TUBB8P8-201ENST00000458717 1058 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.33■□□□□ 0.68
RIPK4P57078 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC19.33■□□□□ 0.68
RIPK4P57078 AC044849.1-201ENST00000519737 1188 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.33■□□□□ 0.68
RIPK4P57078 AP001258.2-201ENST00000529891 490 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.33■□□□□ 0.68
RIPK4P57078 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.33■□□□□ 0.68
RIPK4P57078 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC19.33■□□□□ 0.68
RIPK4P57078 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC19.33■□□□□ 0.68
RIPK4P57078 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.33■□□□□ 0.68
RIPK4P57078 AL451050.2-201ENST00000606967 682 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC19.33■□□□□ 0.68
RIPK4P57078 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
RIPK4P57078 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RIPK4P57078 AL390755.1-201ENST00000623716 2027 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 AC004899.1-201ENST00000424687 1714 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 INTS4P1-203ENST00000641008 3683 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RIPK4P57078 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 AC113367.3-201ENST00000508316 1912 ntBASIC19.33■□□□□ 0.68
RIPK4P57078 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RIPK4P57078 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC19.33■□□□□ 0.68
RIPK4P57078 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RIPK4P57078 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
RIPK4P57078 AGGF1P1-201ENST00000509500 2073 ntBASIC19.32■□□□□ 0.68
RIPK4P57078 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RIPK4P57078 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RIPK4P57078 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RIPK4P57078 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.32■□□□□ 0.68
RIPK4P57078 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC19.32■□□□□ 0.68
RIPK4P57078 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RIPK4P57078 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RIPK4P57078 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.32■□□□□ 0.68
RIPK4P57078 HNRNPA1P27-201ENST00000412087 955 ntBASIC19.32■□□□□ 0.68
RIPK4P57078 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.32■□□□□ 0.68
RIPK4P57078 AL645933.1-201ENST00000440087 609 ntBASIC19.32■□□□□ 0.68
RIPK4P57078 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.32■□□□□ 0.68
RIPK4P57078 RPL18P13-201ENST00000478088 569 ntBASIC19.32■□□□□ 0.68
RIPK4P57078 AC099548.2-209ENST00000480264 625 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms