Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RNMTL1P1-201ENST00000454103 560 ntBASIC12.98□□□□□ -0.33
FOXG1P55316 PFN1P12-201ENST00000455938 534 ntBASIC12.98□□□□□ -0.33
FOXG1P55316 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.98□□□□□ -0.33
FOXG1P55316 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.98□□□□□ -0.33
FOXG1P55316 DUX4L46-201ENST00000566845 751 ntBASIC12.98□□□□□ -0.33
FOXG1P55316 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.98□□□□□ -0.33
FOXG1P55316 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.98□□□□□ -0.33
FOXG1P55316 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.98□□□□□ -0.33
FOXG1P55316 AL162426.1-201ENST00000624141 743 ntBASIC12.98□□□□□ -0.33
FOXG1P55316 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.98□□□□□ -0.33
FOXG1P55316 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.98□□□□□ -0.33
FOXG1P55316 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
FOXG1P55316 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.97□□□□□ -0.33
FOXG1P55316 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
FOXG1P55316 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 FAM8A2P-201ENST00000528813 1142 ntBASIC12.97□□□□□ -0.33
FOXG1P55316 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.97□□□□□ -0.33
FOXG1P55316 AC132192.2-201ENST00000596206 1147 ntBASIC12.97□□□□□ -0.33
FOXG1P55316 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 AC027601.3-201ENST00000622907 509 ntBASIC12.97□□□□□ -0.33
FOXG1P55316 AL008638.5-201ENST00000623814 1298 ntBASIC12.97□□□□□ -0.33
FOXG1P55316 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
FOXG1P55316 AC015688.4-201ENST00000580780 1647 ntBASIC12.97□□□□□ -0.33
FOXG1P55316 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
FOXG1P55316 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
FOXG1P55316 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
FOXG1P55316 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
FOXG1P55316 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.97□□□□□ -0.33
FOXG1P55316 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
FOXG1P55316 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.97□□□□□ -0.33
FOXG1P55316 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
FOXG1P55316 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 AL390755.1-201ENST00000623716 2027 ntBASIC12.96□□□□□ -0.33
FOXG1P55316 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
FOXG1P55316 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
FOXG1P55316 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
FOXG1P55316 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.96□□□□□ -0.33
FOXG1P55316 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms